EnhancerDB
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  3. rs559673732[chr1:202061040]
Enhancers that have rs559673732[chr1:202061040]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs559673732[chr1:202061040]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202060316 202061099 ZNF143 GTRD no Epithelial (MCF-7) 21367010
chr1 202060799 202061159 ZNF274 GTRD no Bone Marrow (K562) 21367013
chr1 202060813 202061266 ZNF274 GTRD no Cervix (HeLa-S3) 21367014
chr1 202060829 202061177 ZNF274 GTRD no Bone Marrow (K562) 21367015
chr1 202061019 202061040 IRF1 JASPAR yes 34552648
chr1 202061021 202061042 ZNF263 JASPAR yes 34552650
chr1 202061022 202061043 ZNF263 JASPAR yes 34552651
chr1 202061023 202061044 IRF1 JASPAR yes 34552652
chr1 202061025 202061046 IRF1 JASPAR yes 34552653
chr1 202061025 202061046 ZNF263 JASPAR yes 34552654
chr1 202061027 202061048 IRF1 JASPAR yes 34552655
chr1 202061029 202061050 IRF1 JASPAR yes 34552656
chr1 202061033 202061054 IRF1 JASPAR yes 34552657
chr1 202061035 202061050 PRDM1 JASPAR yes 34552658
chr1 202061035 202061050 STAT2 JASPAR yes 34552659
chr1 202061036 202061050 SPIC JASPAR yes 34552660
chr1 202061036 202061050 STAT1 JASPAR yes 34552661
Genes associated with rs559673732[chr1:202061040], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More