EnhancerDB
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  3. rs55971053[chr17:55690458]
Enhancers that have rs55971053[chr17:55690458]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55673238 55692440 enh4492
Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55971053[chr17:55690458]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55689750 55690927 TEF1 GTRD no Bone (Osteoblast) 108274213
chr17 55689760 55690616 ZBTB33 GTRD no Brain (SK-N-SH) 108274214
chr17 55689812 55690687 ZBTB33 GTRD no Brain (SK-N-SH) 108274215
chr17 55689818 55690609 ZBTB33 GTRD no Brain (SK-N-SH) 108274216
chr17 55689842 55690833 ZBTB33 GTRD no Brain (SK-N-SH) 108274217
chr17 55689857 55690649 ZBTB33 GTRD no Brain (SK-N-SH) 108274218
chr17 55689873 55690565 ZBTB33 GTRD no Brain (SK-N-SH) 108274219
chr17 55689883 55690569 ZNF143 GTRD no Epithelial (MCF-7) 21773654
chr17 55689883 55690569 ZNF143 GTRD no Epithelial (MCF-7) 108274220
chr17 55689888 55690604 ZBTB33 GTRD no Brain (SK-N-SH) 108274221
chr17 55689958 55690687 ZBTB33 GTRD no Brain (SK-N-SH) 108274222
chr17 55690000 55690488 ZBTB33 GTRD no Brain (SK-N-SH) 108274225
chr17 55690061 55690545 ZNF274 GTRD no Bone Marrow (K562) 108274227
chr17 55690120 55690627 ZNF274 GTRD no Blood (GM12878) 21773660
chr17 55690120 55690627 ZNF274 GTRD no Blood (GM12878) 108274232
chr17 55690132 55690988 ZNF274 GTRD no Blood (GM12878) 21773661
chr17 55690132 55690988 ZNF274 GTRD no Blood (GM12878) 108274233
chr17 55690187 55690535 ZNF274 GTRD no Liver (HepG2) 21773662
chr17 55690187 55690535 ZNF274 GTRD no Liver (HepG2) 108274234
chr17 55690451 55690463 POU2F1 JASPAR yes 54975467
chr17 55690451 55690464 POU3F3 JASPAR yes 54975468
chr17 55690451 55690465 POU1F1 JASPAR yes 54975469
chr17 55690453 55690462 POU3F4 JASPAR yes 54975470
chr17 55690453 55690462 POU5F1B JASPAR yes 54975471
Genes associated with rs55971053[chr17:55690458], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More