EnhancerDB
  1. Home
  2. SNP
  3. rs559754349[chr12:46554948]
Enhancers that have rs559754349[chr12:46554948]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46542685 46564475 enh14673
Skin (Keratinocyte) Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Brain (SK-N-SH) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs559754349[chr12:46554948]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46553200 46558410 ZBTB33 GTRD no Brain (SK-N-SH) 21540745
chr12 46554469 46554985 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21540783
chr12 46554502 46555032 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21540784
chr12 46554514 46555010 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21540786
chr12 46554701 46558199 ZNF274 GTRD no Cervix (HeLa-S3) 21540787
chr12 46554786 46558559 ZNF274 GTRD no Cervix (HeLa-S3) 21540788
chr12 46554908 46558619 ZNF274 GTRD no Cervix (HeLa-S3) 21540789
chr12 46554934 46556689 ZBTB33 GTRD no Brain (SK-N-SH) 21540790
chr12 46554942 46554954 HNF1B JASPAR yes 120599926
Genes associated with rs559754349[chr12:46554948], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More