EnhancerDB
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  3. rs559847307[chr19:1205197]
Enhancers that have rs559847307[chr19:1205197]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1201505 1220340 enh17841
Bone Marrow (K562) Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs559847307[chr19:1205197]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1204535 1208598 TCF7L2 GTRD no Colon (HCT116) 21831760
chr19 1204535 1208598 TCF7L2 GTRD no Colon (HCT116) 108351157
chr19 1204851 1208265 TCF7L2 GTRD no Colon (HCT116) 21831761
chr19 1204851 1208265 TCF7L2 GTRD no Colon (HCT116) 108351158
chr19 1204874 1208511 ZNF274 GTRD no Blood (GM12878) 108351159
chr19 1204948 1208400 ZNF274 GTRD no Bone Marrow (K562) 21831762
chr19 1204948 1208400 ZNF274 GTRD no Bone Marrow (K562) 108351160
chr19 1204973 1208507 ZNF274 GTRD no Bone Marrow (K562) 21831763
chr19 1204973 1208507 ZNF274 GTRD no Bone Marrow (K562) 108351161
chr19 1205025 1208739 ZNF274 GTRD no Bone Marrow (K562) 21831764
chr19 1205025 1208739 ZNF274 GTRD no Bone Marrow (K562) 108351162
chr19 1205039 1208342 TCF7L2 GTRD no Colon (HCT116) 21831765
chr19 1205039 1208342 TCF7L2 GTRD no Colon (HCT116) 108351163
chr19 1205067 1207910 ZNF274 GTRD no Blood (GM12878) 108351164
chr19 1205130 1208766 TCF7L2 GTRD no Colon (HCT116) 21831766
chr19 1205130 1208766 TCF7L2 GTRD no Colon (HCT116) 108351165
chr19 1205178 1205197 REST JASPAR yes 112001948
chr19 1205182 1205197 TFAP2A JASPAR yes 112001950
Genes associated with rs559847307[chr19:1205197], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More