EnhancerDB
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  3. rs559858399[chr12:122223796]
Enhancers that have rs559858399[chr12:122223796]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122219767 122240055 enh2650
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs559858399[chr12:122223796]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122223131 122224827 ZNF274 GTRD no Bone Marrow (K562) 21579347
chr12 122223131 122224827 ZNF274 GTRD no Bone Marrow (K562) 108065461
chr12 122223179 122225333 ZNF274 GTRD no Bone Marrow (K562) 21579348
chr12 122223179 122225333 ZNF274 GTRD no Bone Marrow (K562) 108065462
chr12 122223179 122225333 ZNF274 GTRD no Bone Marrow (K562) 108065463
chr12 122223280 122225041 ZNF274 GTRD no Bone Marrow (K562) 21579349
chr12 122223280 122225041 ZNF274 GTRD no Bone Marrow (K562) 108065464
chr12 122223341 122224474 ZNF274 GTRD no Bone Marrow (K562) 21579350
chr12 122223341 122224474 ZNF274 GTRD no Bone Marrow (K562) 108065465
chr12 122223427 122224772 ZNF274 GTRD no Bone Marrow (K562) 21579351
chr12 122223427 122224772 ZNF274 GTRD no Bone Marrow (K562) 108065466
chr12 122223782 122223801 PITX2 TRANSFAC yes 124246168
chr12 122223788 122223801 ZBTB18 JASPAR yes 124246169
chr12 122223789 122223801 PKNOX1 JASPAR yes 124246170
chr12 122223789 122223801 TGIF1 JASPAR yes 124246171
chr12 122223790 122223799 SNAI2 JASPAR yes 124246172
chr12 122223790 122223800 FIGLA JASPAR yes 124246173
chr12 122223790 122223800 ID4 JASPAR yes 124246174
chr12 122223790 122223800 TCF3 JASPAR yes 124246175
chr12 122223790 122223800 TCF4 JASPAR yes 124246176
chr12 122223792 122223801 ZEB1 JASPAR yes 124246177
chr12 122223792 122223802 TBX21 JASPAR yes 124246178
chr12 122223793 122223801 MGA JASPAR yes 124246179
chr12 122223793 122223801 TBX15 JASPAR yes 124246180
chr12 122223793 122223801 TBX1 JASPAR yes 124246181
chr12 122223793 122223801 TBX4 JASPAR yes 124246182
chr12 122223793 122223801 TBX5 JASPAR yes 124246183
chr12 122223793 122223803 TBR1 JASPAR yes 124246184
chr12 122223793 122223806 SMAD2 JASPAR yes 124246185
Genes associated with rs559858399[chr12:122223796], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More