EnhancerDB
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  3. rs559883932[chr1:12544059]
Enhancers that have rs559883932[chr1:12544059]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12527565 12557135 enh11513
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Blood (T-cell) Liver Astrocyte Lung (PC-9) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs559883932[chr1:12544059]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12543583 12544433 ZNF274 GTRD no Cervix (HeLa-S3) 107802120
chr1 12544048 12544063 FOXP1 JASPAR yes 26824732
chr1 12544049 12544064 FOXP1 JASPAR yes 26824733
chr1 12544050 12544065 FOXP1 JASPAR yes 26824734
chr1 12544054 12544069 FOXP1 JASPAR yes 26824735
chr1 12544054 12544075 IRF1 JASPAR yes 26824736
chr1 12544056 12544068 FOXC2 JASPAR yes 26824737
chr1 12544057 12544071 IRF7 JASPAR yes 26824738
chr1 12544059 12544071 IRF1 JASPAR yes 26824739
Genes associated with rs559883932[chr1:12544059], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More