EnhancerDB
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  3. rs559921336[chr16:88264725]
Enhancers that have rs559921336[chr16:88264725]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs559921336[chr16:88264725]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88262863 88265383 TCF7L2 GTRD no Colon (HCT116) 21735442
chr16 88263317 88266497 TCF7L2 GTRD no Colon (HCT116) 21735446
chr16 88263317 88266497 TCF7L2 GTRD no Colon (HCT116) 108221839
chr16 88264028 88266217 TCF7L2 GTRD no Colon (HCT116) 21735452
chr16 88264234 88265530 ZNF143 GTRD no Epithelial (MCF-7) 21735454
chr16 88264321 88265992 ZNF274 GTRD no Cervix (HeLa-S3) 21735455
chr16 88264321 88266563 TCF7L2 GTRD no Colon (HCT116) 21735456
chr16 88264321 88266563 TCF7L2 GTRD no Colon (HCT116) 108221840
chr16 88264349 88265309 ZNF143 GTRD no Epithelial (MCF-7) 21735457
chr16 88264360 88265356 TCF7L2 GTRD no Colon (HCT116) 21735458
chr16 88264361 88265330 ZNF143 GTRD no Epithelial (MCF-7) 21735459
chr16 88264379 88265301 ZNF143 GTRD no Epithelial (MCF-7) 21735460
chr16 88264382 88265274 ZNF143 GTRD no Epithelial (MCF-7) 21735461
chr16 88264387 88265316 ZNF143 GTRD no Epithelial (MCF-7) 21735462
chr16 88264402 88265879 TCF7L2 GTRD no Colon (HCT116) 21735463
chr16 88264411 88265322 ZNF143 GTRD no Epithelial (MCF-7) 21735464
chr16 88264413 88265334 ZNF143 GTRD no Epithelial (MCF-7) 21735465
chr16 88264413 88265378 ZNF143 GTRD no Epithelial (MCF-7) 21735466
chr16 88264421 88265324 ZNF143 GTRD no Epithelial (MCF-7) 21735467
chr16 88264425 88266199 ZNF274 GTRD no Cervix (HeLa-S3) 21735468
chr16 88264429 88266199 ZNF274 GTRD no Cervix (HeLa-S3) 21735469
chr16 88264437 88265359 TCF7L2 GTRD no Colon (HCT116) 21735470
chr16 88264455 88265394 TCF7L2 GTRD no Colon (HCT116) 21735471
chr16 88264475 88265591 ZNF143 GTRD no Epithelial (MCF-7) 21735472
chr16 88264490 88264987 TCF7L2 GTRD no Colon (HCT116) 21735473
chr16 88264492 88265361 ZNF143 GTRD no Epithelial (MCF-7) 21735474
chr16 88264496 88265556 ZNF143 GTRD no Epithelial (MCF-7) 21735475
chr16 88264510 88265310 TCF7L2 GTRD no Colon (HCT116) 21735476
chr16 88264518 88265308 ZNF143 GTRD no Epithelial (MCF-7) 21735477
chr16 88264527 88265343 ZNF143 GTRD no Epithelial (MCF-7) 21735478
chr16 88264531 88265318 ZNF143 GTRD no Epithelial (MCF-7) 21735479
chr16 88264543 88265350 ZNF143 GTRD no Epithelial (MCF-7) 21735480
chr16 88264547 88265584 ZNF143 GTRD no Epithelial (MCF-7) 21735481
chr16 88264561 88265542 ZNF143 GTRD no Epithelial (MCF-7) 21735482
chr16 88264564 88265292 ZNF143 GTRD no Epithelial (MCF-7) 21735483
chr16 88264568 88265595 ZNF143 GTRD no Epithelial (MCF-7) 21735484
chr16 88264577 88264896 ZNF274 GTRD no Cervix (HeLa-S3) 21735485
chr16 88264577 88265286 ZNF274 GTRD no Cervix (HeLa-S3) 21735486
chr16 88264577 88265321 ZNF143 GTRD no Epithelial (MCF-7) 21735487
chr16 88264584 88265345 ZNF143 GTRD no Epithelial (MCF-7) 21735488
chr16 88264587 88265574 ZNF143 GTRD no Epithelial (MCF-7) 21735489
chr16 88264590 88265705 TCF7L2 GTRD no Colon (HCT116) 21735490
chr16 88264605 88265905 ZNF143 GTRD no Epithelial (MCF-7) 21735491
chr16 88264620 88265579 ZNF143 GTRD no Epithelial (MCF-7) 21735492
chr16 88264643 88265428 ZNF143 GTRD no Epithelial (MCF-7) 21735493
chr16 88264667 88265384 TCF7L2 GTRD no Colon (HCT116) 21735494
chr16 88264668 88265274 ZNF274 GTRD no Cervix (HeLa-S3) 21735495
chr16 88264705 88265291 ZNF143 GTRD no Epithelial (MCF-7) 21735496
chr16 88264707 88264726 CTCF JASPAR yes 12268373
chr16 88264721 88264725 ESR1 TRANSFAC yes 12268374
chr16 88264724 88265348 ZNF143 GTRD no Epithelial (MCF-7) 21735497
chr16 88264725 88264745 TP63 JASPAR yes 12268375
Genes associated with rs559921336[chr16:88264725], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More