EnhancerDB
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  3. rs559940475[chr1:24278322]
Enhancers that have rs559940475[chr1:24278322]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24265865 24284077 enh132
Astrocyte Blood (Karpas-422) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs559940475[chr1:24278322]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24278317 24278329 IRF1 JASPAR yes 27471381
chr1 24278321 24278328 MEIS1 JASPAR yes 27471382
chr1 24278321 24278329 MEIS2 JASPAR yes 27471383
chr1 24278321 24278329 MEIS3 JASPAR yes 27471384
chr1 24278322 24278334 PKNOX1 JASPAR yes 27471385
Genes associated with rs559940475[chr1:24278322], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More