EnhancerDB
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  3. rs559948906[chr1:15509855]
Enhancers that have rs559948906[chr1:15509855]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15498831 15536635 enh11531
Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs559948906[chr1:15509855]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15509843 15509857 RXRB JASPAR yes 26968120
chr1 15509843 15509861 RARA JASPAR yes 26968121
chr1 15509847 15509863 SOX8 JASPAR yes 26968122
Genes associated with rs559948906[chr1:15509855], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More