EnhancerDB
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  3. rs559960643[chr17:79689836]
Enhancers that have rs559960643[chr17:79689836]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79687096 79705379 enh17447
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs559960643[chr17:79689836]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79689314 79689854 TCF7L2 GTRD no Colon (HCT116) 21798228
chr17 79689428 79689892 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21798230
chr17 79689513 79689839 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21798233
chr17 79689542 79689872 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21798234
chr17 79689554 79689890 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21798236
chr17 79689554 79690118 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21798237
chr17 79689556 79689896 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21798238
chr17 79689686 79690302 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21798240
chr17 79689832 79689842 SREBF1 JASPAR yes 56339099
chr17 79689834 79689851 ESR1 JASPAR yes 56339100
Genes associated with rs559960643[chr17:79689836], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More