EnhancerDB
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  3. rs559970800[chr1:22365717]
Enhancers that have rs559970800[chr1:22365717]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22362561 22373835 enh11596
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs559970800[chr1:22365717]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22365329 22366282 ZNF274 GTRD no Bone Marrow (K562) 107802385
chr1 22365711 22365726 FOXP1 JASPAR yes 27340950
chr1 22365716 22365726 HOXA13 JASPAR yes 27340951
chr1 22365716 22365726 HOXB13 JASPAR yes 27340952
chr1 22365716 22365726 HOXD13 JASPAR yes 27340953
chr1 22365716 22365727 HOXA10 JASPAR yes 27340954
chr1 22365717 22365726 CDX1 JASPAR yes 27340955
chr1 22365717 22365728 CDX2 JASPAR yes 27340956
Genes associated with rs559970800[chr1:22365717], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More