EnhancerDB
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  3. rs560055004[chr6:18335677]
Enhancers that have rs560055004[chr6:18335677]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 18333303 18355574 enh8984
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs560055004[chr6:18335677]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 18335668 18335683 FOXA1 JASPAR yes 100432614
chr6 18335669 18335681 FOXI1 JASPAR yes 100432615
chr6 18335669 18335684 FOXP1 JASPAR yes 100432616
chr6 18335670 18335681 FOXP2 JASPAR yes 100432617
chr6 18335670 18335682 FOXC2 JASPAR yes 100432618
chr6 18335670 18335684 FOXF2 JASPAR yes 100432619
chr6 18335671 18335679 FOXG1 JASPAR yes 100432620
chr6 18335671 18335679 FOXO3 JASPAR yes 100432621
chr6 18335671 18335682 FOXB1 JASPAR yes 100432622
chr6 18335671 18335682 FOXC1 JASPAR yes 100432623
chr6 18335671 18335687 POU4F3 JASPAR yes 100432624
chr6 18335672 18335683 FOXA1 JASPAR yes 100432625
chr6 18335672 18335687 FOXA1 JASPAR yes 100432626
chr6 18335673 18335685 FOXI1 JASPAR yes 100432627
chr6 18335673 18335687 POU4F1 JASPAR yes 100432628
chr6 18335673 18335688 FOXP1 JASPAR yes 100432629
chr6 18335673 18335688 HNF1A JASPAR yes 100432630
chr6 18335674 18335686 FOXC2 JASPAR yes 100432631
chr6 18335674 18335688 ONECUT2 JASPAR yes 100432632
chr6 18335674 18335688 ONECUT3 JASPAR yes 100432633
chr6 18335675 18335686 FOXB1 JASPAR yes 100432634
chr6 18335675 18335686 FOXC1 JASPAR yes 100432635
chr6 18335675 18335686 PROP1 JASPAR yes 100432636
chr6 18335676 18335680 YY1 TRANSFAC yes 100432637
Genes associated with rs560055004[chr6:18335677], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More