EnhancerDB
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  3. rs560175981[chr1:180895605]
Enhancers that have rs560175981[chr1:180895605]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180889388 180897070 enh12427
Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs560175981[chr1:180895605]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180895258 180896125 ZNF274 GTRD no Liver (HepG2) 21354176
chr1 180895258 180896125 ZNF274 GTRD no Liver (HepG2) 107848028
chr1 180895563 180895919 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21354177
chr1 180895563 180895919 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107848029
chr1 180895597 180895607 MSC JASPAR yes 33542354
chr1 180895597 180895607 TFAP4 JASPAR yes 33542355
chr1 180895597 180895607 MSC JASPAR yes 118407318
chr1 180895597 180895607 TFAP4 JASPAR yes 118407319
chr1 180895603 180895624 ZNF263 JASPAR yes 33542356
chr1 180895603 180895624 ZNF263 JASPAR yes 118407320
chr1 180895604 180895619 FOXP1 JASPAR yes 33542357
chr1 180895604 180895619 FOXP1 JASPAR yes 118407321
chr1 180895604 180895625 IRF1 JASPAR yes 33542358
chr1 180895604 180895625 IRF1 JASPAR yes 118407322
Genes associated with rs560175981[chr1:180895605], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More