EnhancerDB
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  3. rs560187285[chr17:79699464]
Enhancers that have rs560187285[chr17:79699464]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79687096 79705379 enh17447
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs560187285[chr17:79699464]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79697872 79702757 TCF7L2 GTRD no Colon (HCT116) 21798308
chr17 79697872 79702757 TCF7L2 GTRD no Colon (HCT116) 108310128
chr17 79698203 79702705 TCF7L2 GTRD no Colon (HCT116) 21798310
chr17 79698203 79702705 TCF7L2 GTRD no Colon (HCT116) 108310134
chr17 79698423 79701576 TCF7L2 GTRD no Colon (HCT116) 21798312
chr17 79698423 79701576 TCF7L2 GTRD no Colon (HCT116) 108310138
chr17 79698474 79700278 ZNF143 GTRD no Epithelial (MCF-7) 21798313
chr17 79698493 79701154 TCF7L2 GTRD no Colon (HCT116) 21798314
chr17 79698680 79700810 TCF7L2 GTRD no Colon (HCT116) 21798315
chr17 79698758 79700675 TCF7L2 GTRD no Colon (HCT116) 21798316
chr17 79698846 79701373 TCF7L2 GTRD no Colon (HCT116) 21798317
chr17 79698847 79700434 ZNF143 GTRD no Epithelial (MCF-7) 21798318
chr17 79698921 79702115 TCF7L2 GTRD no Colon (HCT116) 21798320
chr17 79699237 79699601 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21798321
chr17 79699260 79699777 TCF7L2 GTRD no Colon (HCT116) 21798322
chr17 79699446 79699464 NFYA JASPAR yes 56340565
chr17 79699449 79699465 NFYA JASPAR yes 56340566
chr17 79699452 79699467 NFYB JASPAR yes 56340567
chr17 79699456 79699470 TLX1 JASPAR yes 56340569
chr17 79699457 79699471 TLX1 JASPAR yes 56340570
chr17 79699458 79699471 SMAD2 JASPAR yes 56340571
Genes associated with rs560187285[chr17:79699464], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More