EnhancerDB
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  3. rs560253300[chr2:224682573]
Enhancers that have rs560253300[chr2:224682573]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 224677744 224699315 enh34325
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs560253300[chr2:224682573]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 224682566 224682576 NFATC3 JASPAR yes 81290728
chr2 224682566 224682584 SRF JASPAR yes 81290729
chr2 224682567 224682574 NFATC2 JASPAR yes 81290730
chr2 224682568 224682579 STAT3 JASPAR yes 81290731
chr2 224682568 224682583 MEF2C JASPAR yes 81290732
chr2 224682569 224682584 MEF2A JASPAR yes 81290733
Genes associated with rs560253300[chr2:224682573], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More