EnhancerDB
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  3. rs560261950[chr1:31504287]
Enhancers that have rs560261950[chr1:31504287]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 31495565 31517775 enh193
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Neural Stem Cells (H9)
chr1 31504221 31504603 vista1061
VISTA
Transcript factors that have rs560261950[chr1:31504287]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 31503747 31504368 TCF7L2 GTRD no Colon (HCT116) 107802716
chr1 31504284 31504302 SRF JASPAR yes 27900737
chr1 31504284 31504302 SRF JASPAR yes 118265972
Genes associated with rs560261950[chr1:31504287], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More