EnhancerDB
  1. Home
  2. SNP
  3. rs560272201[chr16:373802]
Enhancers that have rs560272201[chr16:373802]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 364825 394775 enh16487
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs560272201[chr16:373802]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 21683784
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 108170123
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 108170124
chr16 373533 375689 ZNF143 GTRD no Epithelial (MCF-7) 21683785
chr16 373533 375689 ZNF143 GTRD no Epithelial (MCF-7) 108170125
chr16 373533 375689 ZNF143 GTRD no Epithelial (MCF-7) 108170126
chr16 373782 373802 RREB1 JASPAR yes 9104441
chr16 373783 375527 ZNF143 GTRD no Epithelial (MCF-7) 21683786
chr16 373783 375527 ZNF143 GTRD no Epithelial (MCF-7) 108170127
chr16 373783 375527 ZNF143 GTRD no Epithelial (MCF-7) 108170128
chr16 373784 373804 RREB1 JASPAR yes 9104442
chr16 373786 373806 RREB1 JASPAR yes 9104443
chr16 373788 373808 RREB1 JASPAR yes 9104444
chr16 373790 373810 RREB1 JASPAR yes 9104445
chr16 373792 373812 RREB1 JASPAR yes 9104446
chr16 373795 373815 RREB1 JASPAR yes 9104447
chr16 373798 373818 RREB1 JASPAR yes 9104448
chr16 373799 373819 RREB1 JASPAR yes 9104449
chr16 373800 373820 RREB1 JASPAR yes 9104450
chr16 373801 373816 FOXP1 JASPAR yes 9104451
Genes associated with rs560272201[chr16:373802], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More