EnhancerDB
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  3. rs56030827[chr12:96631534]
Enhancers that have rs56030827[chr12:96631534]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96582645 96638775 enh14921
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr12 96631530 96631765 vista14558
VISTA
Transcript factors that have rs56030827[chr12:96631534]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96631477 96631921 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21567656
chr12 96631477 96631921 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108053202
chr12 96631513 96631869 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21567657
chr12 96631513 96631869 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108053203
chr12 96631531 96631541 TEAD1 JASPAR yes 82460844
chr12 96631531 96631541 TEAD4 JASPAR yes 82460845
chr12 96631531 96631541 TEAD1 JASPAR yes 123051664
chr12 96631531 96631541 TEAD4 JASPAR yes 123051665
chr12 96631531 96631543 TEAD1 JASPAR yes 82460846
chr12 96631531 96631543 TEAD1 JASPAR yes 123051666
chr12 96631532 96631540 TEAD3 JASPAR yes 82460847
chr12 96631532 96631540 TEAD3 JASPAR yes 123051667
Genes associated with rs56030827[chr12:96631534], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More