EnhancerDB
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  3. rs560348019[chr16:88263793]
Enhancers that have rs560348019[chr16:88263793]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs560348019[chr16:88263793]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88262812 88264212 TCF7L2 GTRD no Colon (HCT116) 21735441
chr16 88262863 88265383 TCF7L2 GTRD no Colon (HCT116) 21735442
chr16 88263317 88266497 TCF7L2 GTRD no Colon (HCT116) 21735446
chr16 88263317 88266497 TCF7L2 GTRD no Colon (HCT116) 108221839
chr16 88263596 88264324 ZNF143 GTRD no Epithelial (MCF-7) 21735447
chr16 88263753 88264251 TCF7L2 GTRD no Colon (HCT116) 21735448
chr16 88263792 88263802 RELA JASPAR yes 12268215
Genes associated with rs560348019[chr16:88263793], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More