EnhancerDB
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  3. rs560355032[chr1:24525380]
Enhancers that have rs560355032[chr1:24525380]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24520263 24535320 enh49684
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Liver Blood (OCI-LY7) Stomach Peripheral Blood (MM.1S) Breast Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Uterus Epithelial (MCF-7)
Transcript factors that have rs560355032[chr1:24525380]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24525365 24525380 HNF1A JASPAR yes 27485977
chr1 24525365 24525386 IRF1 JASPAR yes 27485978
chr1 24525366 24525387 IRF1 JASPAR yes 27485979
chr1 24525370 24525385 FOXP1 JASPAR yes 27485980
chr1 24525371 24525386 FOXP1 JASPAR yes 27485981
chr1 24525372 24525387 FOXP1 JASPAR yes 27485982
chr1 24525373 24525388 FOXP1 JASPAR yes 27485983
chr1 24525376 24525391 MEF2C JASPAR yes 27485984
Genes associated with rs560355032[chr1:24525380], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More