EnhancerDB
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  3. rs560367647[chr1:172886998]
Enhancers that have rs560367647[chr1:172886998]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs560367647[chr1:172886998]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172886836 172887516 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350458
chr1 172886836 172887516 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846259
chr1 172886970 172887446 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350459
chr1 172886970 172887446 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846260
chr1 172886982 172887528 ZBTB33 GTRD no Lung (A549) 21350460
chr1 172886982 172887528 ZBTB33 GTRD no Lung (A549) 107846261
chr1 172886989 172887565 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350461
chr1 172886989 172887565 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846262
chr1 172886992 172887532 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350462
chr1 172886992 172887532 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846263
chr1 172886992 172887786 ZBTB33 GTRD no Lung (A549) 21350463
chr1 172886992 172887786 ZBTB33 GTRD no Lung (A549) 107846264
chr1 172886993 172887005 POU2F1 JASPAR yes 33166149
chr1 172886993 172887006 POU3F3 JASPAR yes 33166150
chr1 172886994 172887006 POU3F1 JASPAR yes 33166151
chr1 172886994 172887006 POU3F2 JASPAR yes 33166152
chr1 172886995 172887004 POU3F4 JASPAR yes 33166153
chr1 172886995 172887004 POU5F1B JASPAR yes 33166154
chr1 172886995 172887009 MTF1 JASPAR yes 33166155
Genes associated with rs560367647[chr1:172886998], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More