EnhancerDB
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  3. rs560455700[chr1:43946966]
Enhancers that have rs560455700[chr1:43946966]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43924725 43950195 enh11811
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Stomach
Transcript factors that have rs560455700[chr1:43946966]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43946962 43946976 ONECUT3 JASPAR yes 28499308
chr1 43946962 43946977 FOXP1 JASPAR yes 28499309
chr1 43946963 43946978 FOXA1 JASPAR yes 28499310
chr1 43946963 43946979 POU4F2 JASPAR yes 28499311
chr1 43946964 43946975 FOXC1 JASPAR yes 28499312
chr1 43946964 43946976 FOXC2 JASPAR yes 28499313
chr1 43946966 43946980 ONECUT2 JASPAR yes 28499314
chr1 43946966 43946980 ONECUT3 JASPAR yes 28499315
chr1 43946966 43946981 FOXP1 JASPAR yes 28499316
chr1 43946966 43946981 HNF1A JASPAR yes 28499317
Genes associated with rs560455700[chr1:43946966], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More