EnhancerDB
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  3. rs560467481[chr2:236411344]
Enhancers that have rs560467481[chr2:236411344]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 236405325 236429424 enh19364
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs560467481[chr2:236411344]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 236411332 236411347 FOXA1 JASPAR yes 81974973
chr2 236411334 236411346 FOXC2 JASPAR yes 81974974
chr2 236411334 236411347 POU2F2 JASPAR yes 81974975
chr2 236411338 236411359 IRF1 JASPAR yes 81974977
chr2 236411339 236411360 IRF1 JASPAR yes 81974978
chr2 236411340 236411361 IRF1 JASPAR yes 81974979
chr2 236411341 236411362 IRF1 JASPAR yes 81974980
chr2 236411342 236411357 FOXP1 JASPAR yes 81974981
chr2 236411342 236411363 IRF1 JASPAR yes 81974982
chr2 236411343 236411358 FOXP1 JASPAR yes 81974983
chr2 236411343 236411364 IRF1 JASPAR yes 81974984
chr2 236411344 236411359 FOXP1 JASPAR yes 81974985
chr2 236411344 236411365 IRF1 JASPAR yes 81974986
Genes associated with rs560467481[chr2:236411344], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More