EnhancerDB
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  3. rs560483929[chr12:47613885]
Enhancers that have rs560483929[chr12:47613885]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 47604098 47625535 enh2315
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
chr12 47613849 47614234 vista13271
VISTA
Transcript factors that have rs560483929[chr12:47613885]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 47613673 47614051 ZNF143 GTRD no Epithelial (MCF-7) 21543112
chr12 47613673 47614051 ZNF143 GTRD no Epithelial (MCF-7) 108028497
chr12 47613864 47613885 IRF1 JASPAR yes 82397468
chr12 47613864 47613885 IRF1 JASPAR yes 120685467
chr12 47613866 47613887 ZNF263 JASPAR yes 82397470
chr12 47613866 47613887 ZNF263 JASPAR yes 120685469
chr12 47613867 47613888 IRF1 JASPAR yes 82397471
chr12 47613867 47613888 IRF1 JASPAR yes 120685470
chr12 47613869 47613890 ZNF263 JASPAR yes 82397473
chr12 47613869 47613890 ZNF263 JASPAR yes 120685472
chr12 47613870 47613891 ZNF263 JASPAR yes 82397474
chr12 47613870 47613891 ZNF263 JASPAR yes 120685473
chr12 47613883 47613899 SOX8 JASPAR yes 82397475
chr12 47613883 47613899 SOX8 JASPAR yes 120685474
chr12 47613885 47613896 DMRT3 JASPAR yes 82397476
chr12 47613885 47613896 DMRT3 JASPAR yes 120685475
Genes associated with rs560483929[chr12:47613885], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More