EnhancerDB
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  3. rs560501204[chr3:124533340]
Enhancers that have rs560501204[chr3:124533340]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 124524802 124535775 enh20880
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs560501204[chr3:124533340]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 124533320 124533341 IRF1 JASPAR yes 5403281
chr3 124533324 124533345 IRF1 JASPAR yes 5403286
chr3 124533325 124533340 FOXP1 JASPAR yes 5403287
chr3 124533325 124533346 IRF1 JASPAR yes 5403288
chr3 124533326 124533341 FOXP1 JASPAR yes 5403289
chr3 124533326 124533347 IRF1 JASPAR yes 5403290
chr3 124533327 124533342 FOXP1 JASPAR yes 5403291
chr3 124533329 124533344 FOXP1 JASPAR yes 5403292
chr3 124533330 124533345 STAT2 JASPAR yes 5403293
chr3 124533330 124533351 IRF1 JASPAR yes 5403294
Genes associated with rs560501204[chr3:124533340], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More