EnhancerDB
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  3. rs560555398[chr2:25593454]
Enhancers that have rs560555398[chr2:25593454]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 25580985 25601915 enh5365
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Bone (Osteoblast) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Pancreas (Panc1) Uterus Stomach
Transcript factors that have rs560555398[chr2:25593454]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 25593446 25593456 MSC JASPAR yes 72470414
chr2 25593453 25593468 RUNX2 JASPAR yes 72470415
Genes associated with rs560555398[chr2:25593454], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More