EnhancerDB
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  3. rs560772969[chr1:222000537]
Enhancers that have rs560772969[chr1:222000537]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 221995465 222021667 enh12697
Liver Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs560772969[chr1:222000537]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 221999961 222000611 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21382804
chr1 221999961 222000611 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107872201
chr1 222000028 222000538 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21382805
chr1 222000028 222000538 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107872202
chr1 222000050 222000544 ZNF274 GTRD no Liver (HepG2) 107872203
chr1 222000095 222000620 ZNF274 GTRD no Cervix (HeLa-S3) 21382806
chr1 222000095 222000620 ZNF274 GTRD no Cervix (HeLa-S3) 107872205
chr1 222000199 222000715 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21382812
chr1 222000199 222000715 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107872220
chr1 222000517 222000537 PPARG JASPAR yes 35572179
Genes associated with rs560772969[chr1:222000537], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More