EnhancerDB
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  3. rs560784276[chr1:9959386]
Enhancers that have rs560784276[chr1:9959386]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9956449 9968797 enh11490
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs560784276[chr1:9959386]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9959383 9959393 ID4 JASPAR yes 26690789
chr1 9959383 9959393 TCF3 JASPAR yes 26690790
chr1 9959383 9959393 TCF4 JASPAR yes 26690791
chr1 9959384 9959393 SNAI2 JASPAR yes 26690792
chr1 9959385 9959390 USF2 TRANSFAC yes 26690793
Genes associated with rs560784276[chr1:9959386], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More