EnhancerDB
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  3. rs560784861[chr2:204434536]
Enhancers that have rs560784861[chr2:204434536]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 204433605 204453715 enh6121
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Lung
Transcript factors that have rs560784861[chr2:204434536]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 204434515 204434536 IRF1 JASPAR yes 80240133
chr2 204434520 204434538 IRF2 JASPAR yes 80240134
chr2 204434521 204434542 IRF1 JASPAR yes 80240135
chr2 204434523 204434538 PRDM1 JASPAR yes 80240136
chr2 204434523 204434538 STAT2 JASPAR yes 80240137
chr2 204434524 204434538 STAT1 JASPAR yes 80240138
chr2 204434525 204434537 IRF1 JASPAR yes 80240139
chr2 204434525 204434539 IRF7 JASPAR yes 80240140
chr2 204434525 204434539 IRF8 JASPAR yes 80240141
chr2 204434525 204434540 IRF9 JASPAR yes 80240142
chr2 204434529 204434544 STAT2 JASPAR yes 80240143
chr2 204434535 204434544 PITX3 JASPAR yes 80240144
chr2 204434535 204434545 GSC2 JASPAR yes 80240145
chr2 204434535 204434545 GSC JASPAR yes 80240146
chr2 204434536 204434544 OTX1 JASPAR yes 80240147
Genes associated with rs560784861[chr2:204434536], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More