EnhancerDB
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  3. rs560787541[chr12:96591312]
Enhancers that have rs560787541[chr12:96591312]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96582645 96638775 enh14921
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560787541[chr12:96591312]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96591302 96591323 IRF1 JASPAR yes 123045766
chr12 96591304 96591319 PRDM1 JASPAR yes 123045767
chr12 96591305 96591319 STAT1 JASPAR yes 123045768
chr12 96591306 96591320 IRF7 JASPAR yes 123045769
chr12 96591306 96591320 IRF8 JASPAR yes 123045770
chr12 96591306 96591321 IRF9 JASPAR yes 123045771
chr12 96591308 96591329 IRF1 JASPAR yes 123045772
chr12 96591310 96591325 PRDM1 JASPAR yes 123045773
chr12 96591310 96591325 STAT2 JASPAR yes 123045774
chr12 96591311 96591325 SPIC JASPAR yes 123045775
chr12 96591311 96591325 STAT1 JASPAR yes 123045776
Genes associated with rs560787541[chr12:96591312], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More