EnhancerDB
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  3. rs56078988[chr17:45941615]
Enhancers that have rs56078988[chr17:45941615]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 45938065 45965315 enh17194
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs56078988[chr17:45941615]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 45941596 45941617 IRF1 JASPAR yes 54542669
chr17 45941597 45941618 IRF1 JASPAR yes 54542670
chr17 45941603 45941624 IRF1 JASPAR yes 54542673
chr17 45941604 45941625 IRF1 JASPAR yes 54542674
chr17 45941608 45941622 IRF7 JASPAR yes 54542675
chr17 45941609 45941629 RREB1 JASPAR yes 54542676
chr17 45941609 45941630 IRF1 JASPAR yes 54542677
chr17 45941610 45941616 TCF4 TRANSFAC yes 54542678
chr17 45941610 45941625 FOXP1 JASPAR yes 54542679
chr17 45941610 45941631 IRF1 JASPAR yes 54542680
chr17 45941611 45941626 STAT2 JASPAR yes 54542681
chr17 45941614 45941626 IRF1 JASPAR yes 54542682
chr17 45941614 45941628 IRF7 JASPAR yes 54542683
chr17 45941615 45941635 RREB1 JASPAR yes 54542684
chr17 45941615 45941636 IRF1 JASPAR yes 54542685
Genes associated with rs56078988[chr17:45941615], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More