EnhancerDB
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  3. rs560801142[chr17:70408552]
Enhancers that have rs560801142[chr17:70408552]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs560801142[chr17:70408552]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70408544 70408553 SP1 TRANSFAC yes 55784960
chr17 70408545 70408553 SP1 TRANSFAC yes 55784961
chr17 70408545 70408555 SP1 JASPAR yes 55784962
Genes associated with rs560801142[chr17:70408552], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More