EnhancerDB
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  3. rs560864673[chr16:88339298]
Enhancers that have rs560864673[chr16:88339298]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88327201 88357367 enh16902
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus
Transcript factors that have rs560864673[chr16:88339298]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88337983 88340927 ZNF143 GTRD no Epithelial (MCF-7) 108221908
chr16 88337983 88340927 ZNF143 GTRD no Epithelial (MCF-7) 108221909
chr16 88337983 88340927 ZNF143 GTRD no Epithelial (MCF-7) 108221910
chr16 88338004 88339360 ZNF143 GTRD no Epithelial (MCF-7) 108221912
chr16 88338087 88339509 TCF7L2 GTRD no Colon (HCT116) 108221921
chr16 88338138 88343321 ZNF143 GTRD no Epithelial (MCF-7) 108221932
chr16 88338138 88343321 ZNF143 GTRD no Epithelial (MCF-7) 108221933
chr16 88339285 88339305 TP63 JASPAR yes 12276243
chr16 88339286 88339304 TP53 JASPAR yes 12276244
chr16 88339287 88339302 TP53 JASPAR yes 12276245
chr16 88339287 88339307 TP53 JASPAR yes 12276246
chr16 88339293 88339313 TP53 JASPAR yes 12276247
chr16 88339295 88339315 TP63 JASPAR yes 12276248
chr16 88339296 88339314 TP53 JASPAR yes 12276249
chr16 88339296 88339314 TP63 JASPAR yes 12276250
chr16 88339296 88339314 TP73 JASPAR yes 12276251
chr16 88339297 88339312 TP53 JASPAR yes 12276252
chr16 88339298 88339313 TP53 JASPAR yes 12276253
Genes associated with rs560864673[chr16:88339298], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More