EnhancerDB
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  3. rs560873524[chr17:70367888]
Enhancers that have rs560873524[chr17:70367888]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs560873524[chr17:70367888]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70367883 70367904 IRF1 JASPAR yes 55779169
chr17 70367887 70367902 PRDM1 JASPAR yes 55779170
chr17 70367888 70367900 IRF1 JASPAR yes 55779171
Genes associated with rs560873524[chr17:70367888], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More