EnhancerDB
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  3. rs560906221[chr19:1214100]
Enhancers that have rs560906221[chr19:1214100]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1201505 1220340 enh17841
Bone Marrow (K562) Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Thymus Heart
chr19 1213863 1214369 vista28150
VISTA
Transcript factors that have rs560906221[chr19:1214100]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1213167 1215783 ZNF274 GTRD no Blood (GM12878) 108351407
chr19 1213167 1215783 ZNF274 GTRD no Blood (GM12878) 108351408
chr19 1213178 1214911 ZNF274 GTRD no Blood (GM12878) 108351409
chr19 1213184 1214331 AR GTRD no Prostate (PC-3) 108351410
chr19 1213187 1214624 ZNF274 GTRD no Blood (GM12878) 108351411
chr19 1213199 1214768 ZNF274 GTRD no Blood (GM12878) 108351412
chr19 1213276 1215146 ZNF274 GTRD no Blood (GM12878) 108351413
chr19 1213276 1215146 ZNF274 GTRD no Blood (GM12878) 108351414
chr19 1213277 1214160 ZNF274 GTRD no Blood (GM12878) 108351415
chr19 1213282 1214434 ZNF274 GTRD no Blood (GM12878) 108351416
chr19 1213350 1215969 TCF7L2 GTRD no Colon (HCT116) 21831910
chr19 1213350 1215969 TCF7L2 GTRD no Colon (HCT116) 108351417
chr19 1213350 1215969 TCF7L2 GTRD no Colon (HCT116) 108351418
chr19 1213356 1214642 ZNF274 GTRD no Bone Marrow (K562) 21831911
chr19 1213356 1214642 ZNF274 GTRD no Bone Marrow (K562) 108351419
chr19 1213359 1214762 ZNF274 GTRD no Blood (GM12878) 108351420
chr19 1213365 1215040 TCF7L2 GTRD no Colon (HCT116) 21831912
chr19 1213365 1215040 TCF7L2 GTRD no Colon (HCT116) 108351422
chr19 1213365 1215040 TCF7L2 GTRD no Colon (HCT116) 108351423
chr19 1213389 1215923 TCF7L2 GTRD no Colon (HCT116) 21831913
chr19 1213389 1215923 TCF7L2 GTRD no Colon (HCT116) 108351424
chr19 1213389 1215923 TCF7L2 GTRD no Colon (HCT116) 108351425
chr19 1213401 1214665 ZNF274 GTRD no Blood (GM12878) 108351426
chr19 1213417 1214329 ZBTB33 GTRD no Brain (SK-N-SH) 21831915
chr19 1213417 1214329 ZBTB33 GTRD no Brain (SK-N-SH) 108351428
chr19 1213523 1214470 ZNF274 GTRD no Blood (GM12878) 108351429
chr19 1213542 1214457 P63 GTRD no Skin (Keratinocyte) 108351430
chr19 1213545 1214484 ZNF274 GTRD no Blood (GM12878) 108351431
chr19 1213577 1214451 P63 GTRD no Skin (Keratinocyte) 108351432
chr19 1213587 1214429 ZNF274 GTRD no Blood (GM12878) 108351433
chr19 1213628 1214335 P63 GTRD no Skin (Keratinocyte) 108351434
chr19 1213660 1214364 ZBTB33 GTRD no Brain (SK-N-SH) 21831916
chr19 1213660 1214364 ZBTB33 GTRD no Brain (SK-N-SH) 108351435
chr19 1213661 1214221 ZNF274 GTRD no Blood (GM12878) 108351436
chr19 1213661 1214307 ZBTB33 GTRD no Brain (SK-N-SH) 21831917
chr19 1213661 1214307 ZBTB33 GTRD no Brain (SK-N-SH) 108351437
chr19 1213683 1214428 ERG GTRD no Prostate (RWPE1) 108351438
chr19 1213693 1214570 ZNF274 GTRD no Blood (GM12878) 108351439
chr19 1213700 1214161 ZNF274 GTRD no Blood (GM12878) 108351440
chr19 1213712 1214342 ZBTB33 GTRD no Brain (SK-N-SH) 21831918
chr19 1213712 1214342 ZBTB33 GTRD no Brain (SK-N-SH) 108351441
chr19 1213730 1214421 CTCF GTRD no Spleen 108351442
chr19 1213734 1214384 ZBTB33 GTRD no Brain (SK-N-SH) 21831919
chr19 1213734 1214384 ZBTB33 GTRD no Brain (SK-N-SH) 108351443
chr19 1213741 1214198 ZNF274 GTRD no Blood (GM12878) 108351444
chr19 1213745 1214390 ZBTB33 GTRD no Brain (SK-N-SH) 21831920
chr19 1213745 1214390 ZBTB33 GTRD no Brain (SK-N-SH) 108351445
chr19 1213769 1214288 ZNF274 GTRD no Bone Marrow (K562) 21831921
chr19 1213769 1214288 ZNF274 GTRD no Bone Marrow (K562) 108351446
chr19 1213779 1214523 ZNF274 GTRD no Blood (GM12878) 108351447
chr19 1213780 1214567 ZNF274 GTRD no Blood (GM12878) 108351448
chr19 1213781 1214117 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108351449
chr19 1213781 1214305 ZNF274 GTRD no Blood (GM12878) 108351450
chr19 1213795 1214556 ZNF274 GTRD no Blood (GM12878) 108351451
chr19 1213820 1214480 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108351452
chr19 1213821 1214265 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21831922
chr19 1213821 1214265 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108351453
chr19 1213842 1214198 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21831923
chr19 1213842 1214198 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108351454
chr19 1213888 1214198 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21831924
chr19 1213888 1214198 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108351456
chr19 1213902 1214371 ZNF274 GTRD no Blood (GM12878) 108351457
chr19 1213964 1214161 EBF1 UCSC Txn Factor no Conserved 108351458
chr19 1213964 1214161 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108351459
chr19 1214014 1214181 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108351460
chr19 1214097 1214110 NFKB2 JASPAR yes 70779547
chr19 1214097 1214110 NFKB2 JASPAR yes 112003399
chr19 1214097 1215883 ZNF143 GTRD no Epithelial (MCF-7) 108351461
chr19 1214097 1215883 ZNF143 GTRD no Epithelial (MCF-7) 108351462
chr19 1214098 1214108 RELA JASPAR yes 70779548
chr19 1214098 1214108 RELA JASPAR yes 112003400
chr19 1214098 1214109 NFKB1 JASPAR yes 70779549
chr19 1214098 1214109 NFKB1 JASPAR yes 112003401
chr19 1214100 1214119 CTCF JASPAR yes 70779550
chr19 1214100 1214119 CTCF JASPAR yes 112003402
Genes associated with rs560906221[chr19:1214100], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More