EnhancerDB
  1. Home
  2. SNP
  3. rs560974187[chr17:42625398]
Enhancers that have rs560974187[chr17:42625398]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42617298 42627575 enh17183
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Stomach
chr17 42624802 42626014 vista696
VISTA
chr17 42625233 42625671 vista24893
VISTA
Transcript factors that have rs560974187[chr17:42625398]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42623541 42625545 ZNF274 GTRD no Bone Marrow (K562) 21762459
chr17 42623541 42625545 ZNF274 GTRD no Bone Marrow (K562) 107688170
chr17 42623541 42625545 ZNF274 GTRD no Bone Marrow (K562) 108263064
chr17 42623541 42625545 ZNF274 GTRD no Bone Marrow (K562) 108263065
chr17 42625054 42625678 ZNF274 GTRD no Bone Marrow (K562) 21762563
chr17 42625054 42625678 ZNF274 GTRD no Bone Marrow (K562) 107688203
chr17 42625054 42625678 ZNF274 GTRD no Bone Marrow (K562) 108263228
chr17 42625239 42625471 ZNF274 GTRD no Bone Marrow (K562) 21762564
chr17 42625239 42625471 ZNF274 GTRD no Bone Marrow (K562) 107688204
chr17 42625239 42625471 ZNF274 GTRD no Bone Marrow (K562) 108263229
chr17 42625333 42625643 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21762565
chr17 42625333 42625643 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107688205
chr17 42625333 42625643 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108263230
chr17 42625396 42625406 ZNF740 JASPAR yes 14165
chr17 42625396 42625406 ZNF740 JASPAR yes 21243710
chr17 42625396 42625406 ZNF740 JASPAR yes 54406270
chr17 42625398 42625408 SP1 JASPAR yes 14166
chr17 42625398 42625408 SP1 JASPAR yes 21243711
chr17 42625398 42625408 SP1 JASPAR yes 54406271
chr17 42625398 42625412 PLAG1 JASPAR yes 14167
chr17 42625398 42625412 PLAG1 JASPAR yes 21243712
chr17 42625398 42625412 PLAG1 JASPAR yes 54406272
Genes associated with rs560974187[chr17:42625398], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More