EnhancerDB
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  3. rs560974333[chr5:171866258]
Enhancers that have rs560974333[chr5:171866258]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171850545 171880495 enh22807
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs560974333[chr5:171866258]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171866238 171866259 IRF1 JASPAR yes 67790220
chr5 171866239 171866260 IRF1 JASPAR yes 67790222
chr5 171866243 171866264 IRF1 JASPAR yes 67790225
chr5 171866244 171866259 FOXP1 JASPAR yes 67790226
chr5 171866244 171866265 IRF1 JASPAR yes 67790227
chr5 171866245 171866266 IRF1 JASPAR yes 67790228
chr5 171866249 171866264 FOXP1 JASPAR yes 67790229
chr5 171866249 171866270 IRF1 JASPAR yes 67790230
chr5 171866250 171866265 FOXP1 JASPAR yes 67790231
chr5 171866250 171866271 IRF1 JASPAR yes 67790232
chr5 171866251 171866266 FOXP1 JASPAR yes 67790233
chr5 171866251 171866272 IRF1 JASPAR yes 67790234
chr5 171866252 171866267 FOXP1 JASPAR yes 67790235
chr5 171866252 171866273 IRF1 JASPAR yes 67790236
chr5 171866253 171866268 FOXP1 JASPAR yes 67790237
chr5 171866255 171866270 FOXP1 JASPAR yes 67790238
chr5 171866256 171866271 STAT2 JASPAR yes 67790239
chr5 171866257 171866272 FOXP1 JASPAR yes 67790240
chr5 171866257 171866278 IRF1 JASPAR yes 67790241
chr5 171866258 171866279 IRF1 JASPAR yes 67790242
Genes associated with rs560974333[chr5:171866258], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More