EnhancerDB
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  3. rs561010227[chr6:41681042]
Enhancers that have rs561010227[chr6:41681042]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs561010227[chr6:41681042]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41681028 41681043 ZIC3 JASPAR yes 101668100
chr6 41681039 41681044 SP1 TRANSFAC yes 101668103
chr6 41681042 41681046 LFA1 TRANSFAC yes 101668104
Genes associated with rs561010227[chr6:41681042], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More