EnhancerDB
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  3. rs56102224[chr1:40286670]
Enhancers that have rs56102224[chr1:40286670]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40278465 40303035 enh11766
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs56102224[chr1:40286670]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40286660 40286674 TLX1 JASPAR yes 28293224
chr1 40286660 40286675 RUNX2 JASPAR yes 28293225
chr1 40286662 40286672 TFEB JASPAR yes 28293226
chr1 40286662 40286673 USF2 JASPAR yes 28293227
chr1 40286663 40286673 MAX JASPAR yes 28293228
chr1 40286669 40286673 ESR1 TRANSFAC yes 28293229
chr1 40286669 40286680 USF1 JASPAR yes 28293230
Genes associated with rs56102224[chr1:40286670], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More