EnhancerDB
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  3. rs56102842[chr1:154812238]
Enhancers that have rs56102842[chr1:154812238]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154772139 154826495 enh644
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs56102842[chr1:154812238]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154812232 154812250 ESR1 JASPAR yes 32317131
chr1 154812234 154812249 RFX5 JASPAR yes 32317132
chr1 154812238 154812252 TLX1 JASPAR yes 32317133
Genes associated with rs56102842[chr1:154812238], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 154897210 154909467 - PMVK ENSG00000163344.5 154909467 84972 Heart 0.308887 1308
chr1 155657751 155708801 + DAP3 ENSG00000132676.11 155657751 845513 Liver 0.0601566 1342