EnhancerDB
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  3. rs561052687[chr9:116340004]
Enhancers that have rs561052687[chr9:116340004]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 116325685 116352877 enh25925
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs561052687[chr9:116340004]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 116339990 116340004 PLAG1 JASPAR yes 86426304
chr9 116340000 116340006 SP1 TRANSFAC yes 86426305
chr9 116340002 116340007 SP1 TRANSFAC yes 86426306
chr9 116340004 116340013 SP1 TRANSFAC yes 86426307
Genes associated with rs561052687[chr9:116340004], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More