EnhancerDB
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  3. rs561088008[chr5:171589995]
Enhancers that have rs561088008[chr5:171589995]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs561088008[chr5:171589995]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171589984 171590000 RFX2 JASPAR yes 67769960
chr5 171589984 171590000 RFX3 JASPAR yes 67769961
chr5 171589984 171590000 RFX4 JASPAR yes 67769962
chr5 171589985 171590004 RFX2 JASPAR yes 67769963
Genes associated with rs561088008[chr5:171589995], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More