EnhancerDB
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  3. rs561133711[chr1:212656566]
Enhancers that have rs561133711[chr1:212656566]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212648565 212664795 enh12641
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
chr1 212656151 212656660 vista5002
VISTA
Transcript factors that have rs561133711[chr1:212656566]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212655493 212657460 AR GTRD no Prostate (PC-3) 21378812
chr1 212655493 212657460 AR GTRD no Prostate (PC-3) 107868381
chr1 212655548 212657045 ZNF143 GTRD no Epithelial (MCF-7) 21378814
chr1 212655548 212657045 ZNF143 GTRD no Epithelial (MCF-7) 107868382
chr1 212655727 212656631 ZNF274 GTRD no Cervix (HeLa-S3) 21378815
chr1 212655727 212656631 ZNF274 GTRD no Cervix (HeLa-S3) 107868385
chr1 212655739 212656730 ZNF274 GTRD no Cervix (HeLa-S3) 21378816
chr1 212655739 212656730 ZNF274 GTRD no Cervix (HeLa-S3) 107868386
chr1 212656555 212656570 RUNX2 JASPAR yes 35128573
chr1 212656555 212656570 RUNX2 JASPAR yes 118453013
Genes associated with rs561133711[chr1:212656566], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More