EnhancerDB
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  3. rs561143749[chr19:3373406]
Enhancers that have rs561143749[chr19:3373406]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3362205 3392371 enh17862
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Cervix (HeLa-S3) Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs561143749[chr19:3373406]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3373393 3373411 RARA JASPAR yes 112124642
chr19 3373397 3373418 ZNF263 JASPAR yes 112124644
chr19 3373402 3373419 RXRA JASPAR yes 112124645
chr19 3373404 3373425 ZNF263 JASPAR yes 112124646
chr19 3373405 3373411 SP1 TRANSFAC yes 112124647
chr19 3373405 3373415 SP1 JASPAR yes 112124648
chr19 3373406 3373427 ZNF263 JASPAR yes 112124649
Genes associated with rs561143749[chr19:3373406], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More