EnhancerDB
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  3. rs561200491[chr1:172879764]
Enhancers that have rs561200491[chr1:172879764]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs561200491[chr1:172879764]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172879752 172879764 IRF1 JASPAR yes 33164938
chr1 172879752 172879766 ONECUT2 JASPAR yes 33164939
chr1 172879752 172879766 ONECUT3 JASPAR yes 33164940
Genes associated with rs561200491[chr1:172879764], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More