EnhancerDB
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  3. rs56123388[chr16:88268452]
Enhancers that have rs56123388[chr16:88268452]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs56123388[chr16:88268452]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88268075 88268591 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735561
chr16 88268157 88268627 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21735563
chr16 88268216 88268496 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21735564
chr16 88268223 88268483 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21735565
chr16 88268283 88268799 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735566
chr16 88268351 88268727 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21735567
chr16 88268387 88268677 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21735568
chr16 88268415 88268695 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21735569
chr16 88268451 88268470 PAX5 JASPAR yes 12268845
Genes associated with rs56123388[chr16:88268452], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More