EnhancerDB
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  3. rs561239606[chr2:28593239]
Enhancers that have rs561239606[chr2:28593239]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28576025 28608635 enh18385
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs561239606[chr2:28593239]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28593232 28593247 FOXP1 JASPAR yes 72643092
chr2 28593232 28593253 IRF1 JASPAR yes 72643093
chr2 28593233 28593248 FOXP1 JASPAR yes 72643094
chr2 28593235 28593250 FOXP1 JASPAR yes 72643095
chr2 28593236 28593257 IRF1 JASPAR yes 72643096
chr2 28593237 28593252 FOXP1 JASPAR yes 72643097
chr2 28593237 28593258 IRF1 JASPAR yes 72643098
chr2 28593238 28593259 IRF1 JASPAR yes 72643099
Genes associated with rs561239606[chr2:28593239], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More