EnhancerDB
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  3. rs561255979[chr17:70395719]
Enhancers that have rs561255979[chr17:70395719]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr17 70395717 70396043 vista25804
VISTA
Transcript factors that have rs561255979[chr17:70395719]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70395579 70396246 EP300 UCSC Txn Factor no Conserved 108289837
chr17 70395595 70396065 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21784530
chr17 70395595 70396065 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108289838
chr17 70395617 70396241 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784531
chr17 70395617 70396241 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108289839
chr17 70395617 70396775 TCF7L2 UCSC Txn Factor no Conserved 108289840
chr17 70395634 70396230 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21784532
chr17 70395634 70396230 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108289841
chr17 70395663 70396220 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784533
chr17 70395663 70396220 NFIC UCSC Txn Factor no Conserved 108289842
chr17 70395663 70396220 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108289843
chr17 70395680 70396191 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784534
chr17 70395680 70396191 FOXA2 UCSC Txn Factor no Conserved 108289844
chr17 70395680 70396191 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108289845
chr17 70395689 70396191 FOXA1 UCSC Txn Factor no Conserved 108289846
chr17 70395695 70396184 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784535
chr17 70395695 70396184 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108289847
chr17 70395702 70396191 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784536
chr17 70395702 70396191 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108289848
chr17 70395712 70395721 VENTX JASPAR yes 21287273
chr17 70395712 70395721 VENTX JASPAR yes 55783294
chr17 70395712 70395722 GSX2 JASPAR yes 21287274
chr17 70395712 70395722 MNX1 JASPAR yes 21287275
chr17 70395712 70395722 GSX2 JASPAR yes 55783295
chr17 70395712 70395722 MNX1 JASPAR yes 55783296
chr17 70395712 70395723 HOXA10 JASPAR yes 21287276
chr17 70395712 70395723 HOXA10 JASPAR yes 55783297
chr17 70395713 70395721 BARX1 JASPAR yes 21287277
chr17 70395713 70395721 BARX1 JASPAR yes 55783298
chr17 70395714 70395729 FOXP1 JASPAR yes 21287278
chr17 70395714 70395729 FOXP1 JASPAR yes 55783299
chr17 70395714 70395735 IRF1 JASPAR yes 21287279
chr17 70395714 70395735 IRF1 JASPAR yes 55783300
chr17 70395715 70396055 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784537
chr17 70395715 70396055 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108289849
chr17 70395716 70395731 FOXP1 JASPAR yes 21287280
chr17 70395716 70395731 FOXP1 JASPAR yes 55783301
chr17 70395717 70395732 FOXP1 JASPAR yes 21287281
chr17 70395717 70395732 FOXP1 JASPAR yes 55783302
chr17 70395717 70395941 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784538
chr17 70395717 70395941 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108289850
chr17 70395718 70395724 TBP TRANSFAC yes 21287282
chr17 70395718 70395724 TBP TRANSFAC yes 55783303
chr17 70395718 70395733 FOXP1 JASPAR yes 21287283
chr17 70395718 70395733 FOXP1 JASPAR yes 55783304
chr17 70395719 70395734 FOXP1 JASPAR yes 21287284
chr17 70395719 70395734 FOXP1 JASPAR yes 55783305
Genes associated with rs561255979[chr17:70395719], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More