EnhancerDB
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  3. rs561279502[chr1:172451504]
Enhancers that have rs561279502[chr1:172451504]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172440585 172461255 enh12372
Skin (Keratinocyte) Prostate (PC-3) Stomach Placenta Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs561279502[chr1:172451504]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172448247 172451908 ZNF143 GTRD no Epithelial (MCF-7) 21349936
chr1 172448454 172451937 ZNF143 GTRD no Epithelial (MCF-7) 21349937
chr1 172448533 172451531 ZNF143 GTRD no Epithelial (MCF-7) 21349939
chr1 172448542 172451635 ZNF143 GTRD no Epithelial (MCF-7) 21349940
chr1 172448543 172451637 ZNF143 GTRD no Epithelial (MCF-7) 21349941
chr1 172448598 172451553 ZNF143 GTRD no Epithelial (MCF-7) 21349944
chr1 172448607 172451866 ZNF143 GTRD no Epithelial (MCF-7) 21349947
chr1 172448666 172451876 ZNF143 GTRD no Epithelial (MCF-7) 21349951
chr1 172450298 172451797 ZNF143 GTRD no Epithelial (MCF-7) 21349989
chr1 172450380 172451812 ZNF143 GTRD no Epithelial (MCF-7) 21349990
chr1 172450422 172451571 ZNF143 GTRD no Epithelial (MCF-7) 21349993
chr1 172450435 172451629 ZNF143 GTRD no Epithelial (MCF-7) 21349994
chr1 172450442 172451654 ZNF143 GTRD no Epithelial (MCF-7) 21349995
chr1 172450837 172451545 ZNF143 GTRD no Epithelial (MCF-7) 21349998
chr1 172450900 172451543 ZNF143 GTRD no Epithelial (MCF-7) 21350000
chr1 172450937 172451605 ZNF143 GTRD no Epithelial (MCF-7) 21350003
chr1 172451007 172451649 ZNF143 GTRD no Epithelial (MCF-7) 21350004
chr1 172451020 172451622 ZNF143 GTRD no Epithelial (MCF-7) 21350005
chr1 172451032 172451559 ZNF143 GTRD no Epithelial (MCF-7) 21350006
chr1 172451032 172451789 ZNF143 GTRD no Epithelial (MCF-7) 21350007
chr1 172451059 172451509 ZNF143 GTRD no Epithelial (MCF-7) 21350008
chr1 172451078 172451597 ZNF143 GTRD no Epithelial (MCF-7) 21350009
chr1 172451133 172451586 ZNF143 GTRD no Epithelial (MCF-7) 21350010
chr1 172451218 172451584 ZNF143 GTRD no Epithelial (MCF-7) 21350012
chr1 172451494 172451504 HOXB2 JASPAR yes 33131776
chr1 172451494 172451504 HOXB3 JASPAR yes 33131777
chr1 172451494 172451504 MNX1 JASPAR yes 33131778
chr1 172451494 172451504 POU6F1 JASPAR yes 33131779
chr1 172451500 172451504 YY1 TRANSFAC yes 33131788
chr1 172451500 172451514 IRF8 JASPAR yes 33131789
Genes associated with rs561279502[chr1:172451504], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More