EnhancerDB
  1. Home
  2. SNP
  3. rs561487532[chr1:220908742]
Enhancers that have rs561487532[chr1:220908742]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220903525 220910295 enh941
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Ovary Lung (PC-9) Astrocyte Bone (Osteoblast) Lung Stomach Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs561487532[chr1:220908742]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220908339 220909227 ZNF143 GTRD no Epithelial (MCF-7) 21381827
chr1 220908442 220909295 ZNF143 GTRD no Epithelial (MCF-7) 21381828
chr1 220908446 220909407 ZNF143 GTRD no Epithelial (MCF-7) 21381829
chr1 220908530 220909322 ZNF274 GTRD no Cervix (HeLa-S3) 21381830
chr1 220908586 220909212 ZNF143 GTRD no Epithelial (MCF-7) 21381831
chr1 220908631 220909155 ZNF143 GTRD no Epithelial (MCF-7) 21381832
chr1 220908674 220909273 ZNF143 GTRD no Epithelial (MCF-7) 21381833
chr1 220908684 220908990 ZNF274 GTRD no Cervix (HeLa-S3) 21381834
chr1 220908691 220909015 ZNF274 GTRD no Cervix (HeLa-S3) 21381835
chr1 220908694 220909197 ZNF143 GTRD no Epithelial (MCF-7) 21381836
chr1 220908736 220908743 NKX3-1 JASPAR yes 35506743
chr1 220908737 220908748 NFIL3 JASPAR yes 35506744
chr1 220908738 220908750 DBP JASPAR yes 35506745
chr1 220908738 220908750 HLF JASPAR yes 35506746
chr1 220908738 220908750 TEF JASPAR yes 35506747
chr1 220908740 220908751 NFIL3 JASPAR yes 35506748
Genes associated with rs561487532[chr1:220908742], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More